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Missouri Statewide Rule

Missouri Stormwater Discharge Permit Requirements (Clean Water Law)

Some RestrictionsApplies statewide across Missouri (2026)

Key Facts

Statute
RSMo 644.051 & 644.052
Agency
DNR / Clean Water Commission
Land-disturbance fee
$300
Industrial stormwater fee
$1,350 or $2,350/year
Program
State NPDES operating permit
Last verified: July 31, 2026

Summary

Missouri's Clean Water Law makes it unlawful to discharge stormwater from a point source without an operating permit from the Clean Water Commission, and sets flat statutory permit fees administered by the Department of Natural Resources.

Persons who apply for or possess a site-specific permit solely for industrial storm water shall pay an annual fee of: (1) One thousand three hundred fifty dollars if the design flow is less than one million gallons per day; or (2) Two thousand three hundred fifty dollars if the design flow is equal to or greater than one million gallons per day. ... Three hundred dollars for the discharge of storm water from a land disturbance site

Full Breakdown

Under RSMo Chapter 644, no person may operate, use, or maintain a water contaminant or point source subject to the law unless the person holds an operating permit from the Missouri Clean Water Commission. The Department of Natural Resources administers these permits, which implement the federal NPDES program in Missouri. RSMo 644.052 fixes stormwater permit fees: three hundred dollars for discharge of stormwater from a land disturbance (construction) site, and an annual fee of one thousand three hundred fifty dollars for a site-specific industrial stormwater permit with design flow under one million gallons per day, or two thousand three hundred fifty dollars at or above that flow.

Violations & Penalties

Operating a point source or discharging stormwater without the required permit is unlawful under RSMo 644.051, enforceable by the Missouri Clean Water Commission and the Department of Natural Resources.

Frequently Asked Questions

Do I need a permit for construction site stormwater in Missouri?
Yes. Discharging stormwater from a land disturbance site requires a state operating permit under RSMo Chapter 644, with a three hundred dollar permit fee.
Who administers stormwater permits in Missouri?
The Missouri Department of Natural Resources issues the permits and the Clean Water Commission holds permitting authority under the Missouri Clean Water Law, RSMo 644.006 to 644.141.

Sources

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