Skip to main content
CityRuleLookup

Novato, CA Environmental Rules: Flood Zones (2026)

Significant Restrictions
Compiled from the official code textEditor Martyn O'NeillLast verified October 2026

FEMA flood zone rules in Novato, CA, also called floodplain regulations or special flood hazard area (SFHA) rules, determine flood insurance requirements and elevation standards for new construction.

Key Facts

F1 overlay
Primary floodway; boat docks only, with Use Permit
F2 overlay
Secondary floodway; levees and fill need Review Authority finding
F3 overlay
100-year flood plain; engineering and hydraulic study
F2 agreement parties
Owner, City, Marin County Flood Control District, Water Conservation District
F3 fences and walls
Building Permit required
F3 grading
200 cubic yard exemption does not apply

Summary

In the City of Novato, California, Municipal Code § 19.16.050 applies a Flood Hazard (F) overlay in three tiers. F1 primary floodway land is limited to boat docks with a Use Permit, F2 secondary floodway land restricts levees and fill, and F3 land in the 100-year flood plain needs an engineering and hydraulic study.

A.Purpose and Applicability. ... The F overlay zoning district is applied to areas within the City prone to flood hazard risks, combined with any primary zoning district as shown on the Zoning Map and by Section 19.04.020 (Zoning Districts Established). The intent is to protect people and property from flood hazard risks by appropriately regulating development and land uses within an F overlay district. ... 1.F1 District. The F1 overlay is applied to lands within a primary floodway, including water channels and adjacent flood plains. Allowable land uses shall be limited to boat docks, with Use Permit approval. ... 3.F3 District. The F3 overlay district is applied to land within a 100-year flood plain.a.Limitations on Use. Allowable uses include all those allowed by the primary zoning district.b.Study Required. In cases where structures, fences, levees, dikes or filling may increase the depth or velocity of flood on adjacent lands within the flood plain area, an engineering and hydraulic study shall be prepared, and development shall occur only in compliance with Chapter 5 of the Municipal Code.

Full Breakdown

The F overlay is combined with a primary zoning district on the Zoning Map. Its stated intent is to protect people and property from flood hazard risks by regulating development and land uses. A suffix on the F symbol tells you which tier applies, and any land use normally allowed in the primary district can proceed unless the tier limits it.

F1 covers lands within a primary floodway, including water channels and adjacent flood plains. Allowable land uses are limited to boat docks, with Use Permit approval. F2 covers a secondary floodway, the portion between the F1 limits and where flood inundation can occur at low depths and velocities. Levees, dikes or filling can be allowed only where the Review Authority determines the activity is necessary to permit development and will not reduce the ponding capacity of the affected area. An exception can apply to a specified encroachment area or percentage of each parcel's ponding capacity, with the rest held as a ponding area. Before work starts, the landowner, the City, the Marin County Flood Control District and the Water Conservation District must sign an agreement. Lands in any F1 district on the property are dedicated to the City of Novato, the Marin County Flood Control District and the Water Conservation District, the landowner builds drainage improvements, and a performance bond can be required. Full use of undesignated F2 land requires the ultimate flood control channel improvements through the parcel and downstream to the mouth of the primary floodway.

F3 covers land within a 100-year flood plain, and all uses of the primary district are allowed. Where structures, fences, levees, dikes or filling can increase flood depth or velocity on adjacent land, an engineering and hydraulic study is required and development proceeds only in compliance with Chapter 5 of the Municipal Code. A proposed use must not increase the existing risk of flood damage on other lands, and conditions of approval can require structural measures and financial guarantees. The City can allow development that raises flood depths or velocities only after approving a flood protection plan and a written agreement with affected owners.

Two other chapters tighten F3 sites. All fences and walls in the F3 overlay require a Building Permit under Section 19.20.040.A.2. The grading exemption in Section 19.20.050 for movements under 200 cubic yards does not apply in the F-3 Overlay District.

Violations & Fines

Work in an F overlay without the required Use Permit, study or agreement is a Zoning Ordinance violation. Under Section 19.59.040 it is unlawful and a public nuisance, punishable as a misdemeanor or infraction at the City's election. Section 19.59.040 also authorizes Stop Work Orders, Section 19.59.090 adds a daily civil penalty under the Code Enforcement Fee Schedule, and Section 19.59.090 makes violators liable for the costs and damages the City suffers. The Director's Notice of Violation sets the correction deadline.

Frequently Asked Questions

What can be built in the Novato F1 flood overlay?
Section 19.16.050.B.1 limits allowable land uses in the F1 overlay, applied to lands within a primary floodway including water channels and adjacent flood plains, to boat docks with Use Permit approval. Other uses normally allowed by the primary zoning district are not available on F1 land.
When does Novato require a flood study for development?
In the F3 overlay, applied to land within a 100-year flood plain, an engineering and hydraulic study is required where structures, fences, levees, dikes or filling can increase flood depth or velocity on adjacent lands. Development then proceeds only in compliance with Chapter 5 of the Municipal Code, and the study covers impacts on neighboring property.
Who signs the agreement for fill in a Novato F2 district?
Before engaging in activities on the specified encroachment area or ponding percentage, the landowner or landowners, the City, the Marin County Flood Control District and the Water Conservation District must execute an agreement. It keeps the remaining area for ponding, dedicates any F1 land on the property, and requires drainage improvements by the landowner.
Does a fence in the Novato flood plain need a permit?
Yes. Section 19.20.040.A.2 states that all fences and walls in the F3 overlay district require a Building Permit and must comply with all F3 overlay requirements in addition to the fence rules. Section 19.16.050.B.3.b also requires a hydraulic study where a fence can increase flood depth or velocity on adjacent land.

Sources & Official References

Other rules in Novato

All Novato rules

California rules heatmap·Compare Novato to another location·View the California environmental rules overview

Get notified when Flood Zones in Novato, CA changes

We'll email you the moment we detect a change in the code. No spam, unsubscribe anytime.

We'll never sell or share your email. One-click unsubscribe in every email.

See something wrong?

Help us keep this page accurate. If you notice an error or outdated information, let us know.

Flood Zones in Nearby Cities

How other cities in Marin County handle flood zones.

San Rafael, CA
Some Restrictions